Del Mar Photonics - Newsletter Fall 2010 - Newsletter Winter 2010
Lake Arrowhead 2009
2009 Conference on Ion Chemistry and Mass Spectrometry
January 16–18, 2009
UCLA Conference Center, Lake Arrowhead, California
SCHEDULE OF PRESENTATIONS (pdf)
Friday, January 16
3:30 PM CHECK-IN AND ROOM ASSIGNMENTS
5:30 – 6:30 SOCIAL HOUR
Poster presenters, please put your poster up during the welcome social.
6:30 - 7:30 DINNER
SESSION I Presider: Manuel Manard
7:45 - 8:10
“Design of a New High Resolution Ion Mobility Mass Spectrometer andApplication to Enkephalin Dimer Formation”,
Nicholas Dupuis, Paul Kemper, ChristianBleiholder and Michael T. Bowers*,
University of California, Santa Barbara, CA.8:10 - 8:35
“Using Gas-Phase Ion Chemistry to Investigate Absolute Reduction Potentials andElectron Solvation in Aqueous Solution”,
William A. Donald, Ryan D. Leib, Maria Demireva, M.Jeanette Aiken, and Evan R. Williams*,
University of California, Berkeley, CA.8:35 – 9:00
“Probing the Mechanism of Electron Capture and Electron Transfer Dissociationwith Hydrogen Atom Scavengers and Tags with Variable Electron Affinity”,
Chang Ho Sohn,Cheol K. Chung, Sheng Yin, Prasanna Ramachandran, Ivory Peng, Joseph A. Loo, and J. L.
Beauchamp*, C
alifornia Institute of Technology, Pasadena, CA.Lake Arrowhead 2009
2
9:00 – 11:00 POSTER SESSION, DRINKS, AND DISCUSSION
POSTER PRESENTATIONS
1. “High-Throughput, High-Sensitivity Proteomics Platform for Improved Biomarker Discovery and
Verification”,
Erin S. Baker, Eric A. Livesay, Daniel J. Orton, William F. Danielson III, David C. Prior,Yehia M. Ibrahim, Ronald J. Moore, Keqi Tang, Ryan T. Kelly, Gordon A. Anderson, Mikhail E. Belov,
and Richard D. Smith*,
Pacific Northwest National Laboratory, Richland, WA.2. “Infrared Multiphoton Dissociation Action Spectroscopy of DNA Mononucleotides: Effects of
Cationization on Gas Phase Conformation”,
Yuan-wei Nei, Nuwan Hallowita, Jeffrey D. Steill, JosOomens, and Mary T. Rodgers*,
Wayne State University, Detroit, MI.3. “Structures and Binding Energies of Noncovalent Complexes of Peptidomimetic Protonated Nitrogen
Bases with 18-Crown-6”, Yu Chen and
Mary T. Rodgers*, Wayne State University, Detroit, MI.4. “Manipulating Small Droplets with Pulsed Electric Fields to Examine the Physical Properties and
Chemical Reactivity of Gas-Liquid Interfaces”,
Evan L. Neidholdt and J. L. Beauchamp*, CaliforniaInstitute of Technology, Pasadena, CA.
5. “Surface-Induced Dissociation of Odd-Electron Peptide Ions”,
Julia Laskin*, Zhibo Yang, Corey lam,and Ivan K. Chu,
Pacific Northwest National Laboratory, Richland, WA.6. “Tandem MS/MS Investigation of Positively and Negatively Charged Ions Generated by ESI from
Tholin Samples: An Implication to Titan's Atmospheric Chemistry”,
Arpad Somogyi, Roland Thissen,Veronique Vuitton, and Mark Smith*,
University of Arizona, Tucson, AZ7. “Observing Radical Migration in Peptides Using Photodissociation and Ion-Molecule Reactions”,
BenMoore
, Ryan Julian*, Stephen Blanksby, and Tony Ly, University of California, Riverside.8. “Conformational Effects of Small Molecule Binding to Alpha-Synuclein and its Disease-Related A30P
and A53T Mutants”,
Anna Erickson, Megan Grabenauer, Thomas Wyttenbach, Jay R. Winkler, Harry B.Gray, and Michael Bowers*
University of California, Santa Barbara, CA.9. “Affinity Capture Mass Spectrometry: A Diagnostic for Bacterial Contamination”,
Erin M. Johnson,Walther Ellis, Donna Wolk, and Vicki H. Wysocki*,
University of Arizona, Tucson, AZ.10. “Native Mass Spectrometry as a Structural Probe for Soluble Guanylyl Cyclase”,
Anne E. Blackwelland Vicki H. Wysocki*,
University of Arizona, Tucson, AZ.11. “Electron Affinities of Chlorinated Hydrocarbons and Their Electron Capture Structures”,
L.D.Betowski
*, Mark Enlow, and D.H. Aue, U. S. Environmental Protection Agency, Las Vegas, NV.12. “Using Intensity in Peptide Identification Algorithms”,
Wenzhou Li, Jonathan Goya, and VickiWysocki*,
University of Arizona, Tucson, AZ.13. “Mass-Balanced H/D-Isotope Dipeptide Tags for Simultaneous Peptide Sequencing and Proteon
Quantitation”, Jongcheol Seo, Min-Soo Suh, Hye-Joo Yoon and
Seung Koo Shin*, Pohang University ofScience and Technology, Pohang, South Korea.
Lake Arrowhead 2009
3
POSTER PRESENTATIONS (continued)
14. “Mapping Iodination Sites in Whole Proteins by MALDI-MS for Potential Exploration of Solution
Phase Protein Structure”,
Qingyu Sun and Ryan R. Julian*, University of California, Riverside, CA.15. “Reactions of Alpha Nucleophiles with Alkyl Halides”, Stephanie M. Villano, Nicole Eyet, W. Carl
Lineberger, and
Veronica M. Bierbaum*, University of Colorado, Boulder, CO.16. “Structures of Potassiated Aminocarboxylic Acids and Proline Derivatives by IMS/MS”,
Bing Gao,Thomas Wyttenbach, Miriam K. Drayss, Mathias Schafe, and Michael T. Bowers*,
University ofCalifornia, Santa Barbara, CA
17. “Where Does the Electron Go in Peptide Cation-Radicals?”,
Frantisek Turecek*, Changtong Hao,and Eva Fung,
University of Washington, Seattle, WA.18. “Cross Sectional Areas by Fourier Transform Ion Cyclotron resonance (CRAFTI): A New Method for
Probing Ion Conformation”, Fan Yang, Jacob Voelkel, and
David V. Dearden*, Brigham YoungUniversity, Provo, UT.
19. “Mass Spectrometric Characterization of Monorhamnolipid Produced from
P. Aeruginosa ATCC9027 Complexes with Pb
2+ and UO22+
”, Tracey A. Veres, Arpad Somogyi, and Jeanne E. Pemberton*,University of Arizona, Tucson, AZ.
Lake Arrowhead 2009
4
Saturday, January 17
8:00 –8:30 BREAKFAST
SESSION II Presider: David V. Dearden
8:30 – 8:55
“Wet Grease: Hydration of Hydrophobic Groups Investigated with InfraredPhotodissociation Spectroscopy and Theory”,
James S. Prell and Evan R. Williams*, Universityof California, Berkeley, CA.
8:55 - 9:20
“IRMPD Spectroscopy of Sodiated and Protonated Diethyl and Triethyl PhosphateEsters”,
B. Scott Fales, Nathaniel O. Fujamade, Chunhai Ruan, Jos Oomens, and M. T. Rodgers*,Wayne State University, Detroit, MI.
9:20 – 9:45
“Detecting Phosphorylation the Radical Way”, Jolene K. Diedrich and Ryan R.Julian*,
University of California, Riverside, CA.9:45 – 10:10
“Vibrational Spectroscopy of Fe+(CH4)n”, Murat Citir and Ricardo B. Metz*,University of Massachusetts, Amherst,MA.
10:10 – 10:25 BREAK
10:25 – 10:50
“The Effect of Calcium Ions and Peptide Ligands on the Stability of theCalmodulin Dumbbell Structure”,
Thomas Wyttenbach, Megan Grabenauer, KonstantinosThalassinos, James H. Scrivens, and Michael T. Bowers*,
University of California, SantaBarbara, CA.
10:50 – 11:15
“The Development of Retrosynthetic Glycan Libraries to Profile and Classify theHuman Serum
N-Linked Glycome”, Scott R. Kronewitter, Hyun Joo An, Maria Lorna de Leoz,and Carlito B. Lebrilla*,
University of California, Davis, CA.11:15 – 11:40
“Ionic Reactions in Desorption Electrospray Ionization Mass Spectrometry”, HaoChen
,* Zhixin Jessie Miao, and Yun Winnie Zhang, Ohio University, Athens, OH.11:40 – 12:05
“The Binding Parameter Model: A Quantitative Elucidation of the FundamentalInteractions that Determine the Strength and Specificity of Cation-
π Interactions”, NuwanHallowita
, Ravi Amunugama, Chunhai Ruan, Esitima Udonkang, Cliff Frieler, and M. T.Rodgers*,
Wayne State University, Detroit, MI.12:05 – 2:10 LUNCH AND FREE TIME
2:10 – 2:30 CONFERENCE PHOTO
Lake Arrowhead 2009
5
SESSION III Presider: Nathan Dalleska
2:30 – 2:55
“Ab Initio Protein Folding Probed by All-Atom Molecular Dynamic Simulationswith Replica Exchange Method”,
Chun Wu, Nicholas F. Dupuis, Joan-Emma Shea, and MichaelT. Bowers*,
University of California, Santa Barbara, CA.2:55 - 3:20
“All Roads Lead to Rome: Radical Migration Towards the Beta-Carbon YieldsDissociation of the Peptide Backbone at Tyrosine”,
Tony Ly and Ryan R. Julian*, University ofCalifornia, Riverside, CA.
3:20 – 3:45
“N-linked and Free Oligosaccharide Content of Human Milk”, John Froehlich,Eric Dodds, Richard Seipert, Larry Lerno, Mariana Barboza, and Carlito B. Lebrilla*,
Universityof California, Davis, CA
.3:45 - 4:10
The Photoelectron Spectrum of CCl2-
: The Convergence of Theory and ExperimentAfter a Decade of Debate”,
Scott W. Wren, Kristen M. Vogelhuber, Kent M. Ervin, and W. CarlLineberger*,
University of Colorado, Boulder, CO.4:10 – 4:30 BREAK
4:30 – 4:55
“Discovery of Glycomic Markers for Cancer”, Maria Lorna A. de Leoz, ScottKronewitter, Hyun Joo An, Jaehan Kim, Ruth Vinall, Suzanne Miyamoto, Larry Young, Ralph de
Vere White, Kit S. Lam, and Carlito Lebrilla*,
University of California, Davis, CA.4:55 – 5:20
Investigating Low Barrier Hydrogen Bonds in Linear and Cyclic Diamines”,Sevana Khodagholian
and Thomas Morton*, University of California, Riverside, CA.5:20 –5:45
“The Effects of Rapid Analyte/Solvent Mixing for ESI MS of Peptides andProteins”,
Ivory Peng, Rachel Loo, and Joe Loo*, University of California, Los Angeles, CA.5:45
−6:10 “Formation and Growth of Complex Organics by Gas Phase and IntraclusterReactions”, Paul O. Momoh, Abdel-Rahman Soliman and
M. Samy El-Shall* VirginiaCommonwealth University, Richmond, VA.
6:30 - 8:00 DINNER
Lake Arrowhead 2009
6
8:00 - 9:00 ? SATURDAY EVENING
Presider: Erin S. Baker
Symposium and Celebration
in Honor of
Michael T. Bowers on the
Occasion of his 70
th Birthday!9:00 - 12:00 PARTY
Lake Arrowhead 2009
7
Sunday, January 18
8:00 – 9:00 BREAKFAST
SESSION IV Presider: Hao Chen
9:00 – 9:25
“Structural Studies of Small Peptide Oligomers Using Ion Mobility MassSpectrometry”,
Christian Bleiholder, Nick Dupuis, Michael T. Bowers*”, University ofCalifornia, Santa Barbara, CA.
9:25 - 9:50
“Pulsed Q Dynamic Collision Induced Dissociation, a New Approach for FastFragmentation in the Quadrupole Ion Trap”,
Unige A. Laskay, Shannon L. Cook, and Glen P.Jackson*,
University of Arizona, Tucson, AZ.9:50 – 10:15
“Increasing Charge While Preserving Noncovalent Protein Complexes for ESIMS”,Shirley H. Lomeli
, Sheng Yin, Rachel R. Ogorzalek Loo, and Joseph A. Loo*, Universityof California, Los Angeles, CA.
10:15 – 10:35 BREAK
10:35 – 11:00
“Radical Exchange Between Noncovalently Complexed Peptide Ions”, GeoffreyK. Yeh
, Jolene K. Deidrich, Tony Ly, Claudia Meneses, and Ryan R. Julian*, University ofCalifornia, Riverside, CA.
11:00 – 11:25
“Differentiating Diastereomeric Peptides by Mass Spectrometry”, Aaron Moehligand Thomas H. Morton*,
University of California, Riverside, CA.11:25 - 11:50
“Applications of Large Peptide Clusters”, Tawnya Flick, William A. Donald,Ryan Leib, and Evan R. Williams*,
University of California, Berkeley, CA.11:50 - 12:00 CHECK OUT
12:00 - 1:00 LUNCH AND DEPART
Lake Arrowhead 2009
Del Mar Photonics - Newsletter Fall 2010 - Newsletter Winter 2010